Data Integrator (Python API)
Classes | Variables
cls.GAFReader Namespace Reference

GO annotation file reader. More...

Classes

class  CGAFReader
 

Variables

int GAF_FILTER_NONE = 0;
 Do not filter anything, accept everything from the GOA file. More...
 
int GAF_FILTER_NO_IEA = 1;
 Remove electronically inferred annotations. More...
 

Detailed Description

GO annotation file reader.

Reads in a GO annoatation file and offers some filtering for data records and ontology type.

Author
Chris X. Weichenberger
Date
2014-05-06

Variable Documentation

◆ GAF_FILTER_NO_IEA

int cls.GAFReader.GAF_FILTER_NO_IEA = 1;

Remove electronically inferred annotations.

◆ GAF_FILTER_NONE

int cls.GAFReader.GAF_FILTER_NONE = 0;

Do not filter anything, accept everything from the GOA file.