cls.DrugBankAnnotation Namespace Reference

Annotation of proteins involved in drugs. More...

Classes
class	CDrugPartnerPairList
	Represents a list of drugs for a single partner (that is, protein). More...
class	CDrugPartnerPair
	A drug/partner pair container class. More...
class	CDrugBankAnnotation
	Drugs associated with a protein. More...

Variables
string	DBFLT_GROUP = "group";
	Drug class, for example approved, experimental, withdrawn. More...
string	DBFLT_ACTION = "action";
	Mechanism of interaction with the partner (=protein). More...
string	DBFLT_AFFECTEDORG = "affected-organism";
	Organism in which the drug is targeting the drug partner. More...
string	DBFLT_BONDTYPE = "bondtype";
	Main class of drug binding partner (=protein), target, enzyme, tansporter, carrier. More...
string	DBFLT_KNOWNACTION = "known-action";
	Knowledge on how the drug works. More...

Detailed Description

Annotation of proteins involved in drugs.

This module provides access to drugs via UniProt accession numbers.

Author

Chris X. Weichenberger

Date

2013-11-06

Copyright

See LICENSE file.

Variable Documentation

DBFLT_ACTION

string cls.DrugBankAnnotation.DBFLT_ACTION = "action";

Mechanism of interaction with the partner (=protein).

For example, agonist, cofactor, inhibitor.

DBFLT_AFFECTEDORG

string cls.DrugBankAnnotation.DBFLT_AFFECTEDORG = "affected-organism";

Organism in which the drug is targeting the drug partner.

DBFLT_BONDTYPE

string cls.DrugBankAnnotation.DBFLT_BONDTYPE = "bondtype";

Main class of drug binding partner (=protein), target, enzyme, tansporter, carrier.

DBFLT_GROUP

string cls.DrugBankAnnotation.DBFLT_GROUP = "group";

Drug class, for example approved, experimental, withdrawn.

DBFLT_KNOWNACTION

string cls.DrugBankAnnotation.DBFLT_KNOWNACTION = "known-action";

Knowledge on how the drug works.

Can be a known, not known, or unknown pharmacological action of the drug on the target protein. Only applies to 'target' type of partners.