cls.HSGeneOrthologyMapping.COrthologPair Class Reference

Simple data storage for pairs of orthologous genes, one from Homo sapiens. More...

Collaboration diagram for cls.HSGeneOrthologyMapping.COrthologPair:

Public Member Functions
def	__init__ (s, ensgID, xID, orthType, ensPerc, xPerc, orthConf)
def	__str__ (s)
def	__eq__ (s, b)
	Returns True if two OrthologPairs are identical. More...

Static Public Attributes
string	EnsgID = "";
	Homo sapiens Ensembl gene ID. More...
string	XID = "";
	Orthologous gene's ID. More...
string	OrthType = "";
	Orthology type, possible values are 1:1, 1:N, N:M. More...
string	EnsPerc = "";
	Percentage identity with respect to human gene. More...
string	XPerc = "";
	Percentage identity with respect to orthologous gene. More...
string	OrthConf = "";
	Orthology Confidence, values: possible, real. More...

Detailed Description

Simple data storage for pairs of orthologous genes, one from Homo sapiens.

Constructor & Destructor Documentation

__init__()

def cls.HSGeneOrthologyMapping.COrthologPair.__init__	(		s,
			ensgID,
			xID,
			orthType,
			ensPerc,
			xPerc,
			orthConf
	)

Member Function Documentation

__eq__()

def cls.HSGeneOrthologyMapping.COrthologPair.__eq__	(		s,
			b
	)

Returns True if two OrthologPairs are identical.

__str__()

def cls.HSGeneOrthologyMapping.COrthologPair.__str__

(

s

)

Member Data Documentation

EnsgID

string cls.HSGeneOrthologyMapping.COrthologPair.EnsgID = "";

static

Homo sapiens Ensembl gene ID.

EnsPerc

string cls.HSGeneOrthologyMapping.COrthologPair.EnsPerc = "";

static

Percentage identity with respect to human gene.

(string).

OrthConf

string cls.HSGeneOrthologyMapping.COrthologPair.OrthConf = "";

static

Orthology Confidence, values: possible, real.

OrthType

string cls.HSGeneOrthologyMapping.COrthologPair.OrthType = "";

static

Orthology type, possible values are 1:1, 1:N, N:M.

XID

string cls.HSGeneOrthologyMapping.COrthologPair.XID = "";

static

Orthologous gene's ID.

XPerc

string cls.HSGeneOrthologyMapping.COrthologPair.XPerc = "";

static

Percentage identity with respect to orthologous gene.

(string).

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The documentation for this class was generated from the following file:

• cls/HSGeneOrthologyMapping.py