DefaultTable.py File Reference

Classes
class	cls.DefaultTable.CDefaultTableBase
	Base class for tab-separated file i/o. More...
class	cls.DefaultTable.CDefaultTableReader
	Implements reading of TSV files. More...
class	cls.DefaultTable.CDefaultTableWriter
	Implements writing of TSV files. More...
class	cls.DefaultTable.CVcfTableReader
	Implements reading of VCF files. More...
class	cls.DefaultTable.CVcfTableWriter
	Implements writing of VCF files. More...

Namespaces
	cls.DefaultTable
	Utility classes for reading/writing tab separated tabular data.

Variables
int	cls.DefaultTable.VCF_CHROM_INDX = 0
int	cls.DefaultTable.VCF_POS_INDX = 1
int	cls.DefaultTable.VCF_ID_INDX = 2
int	cls.DefaultTable.VCF_REF_INDX = 3
int	cls.DefaultTable.VCF_ALT_INDX = 4
int	cls.DefaultTable.VCF_QUAL_INDX = 5
int	cls.DefaultTable.VCF_FILTER_INDX = 6
int	cls.DefaultTable.VCF_INFO_INDX = 7
int	cls.DefaultTable.VCF_FORMAT_INDX = 8
int	cls.DefaultTable.VCF_FIRST_SAMPLE_INDX = 9