utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase Class Reference

Base test class for handling multi-column files holding SNP/Gene LD information. More...

Inheritance diagram for utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase:

Collaboration diagram for utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase:

Public Member Functions
def	setUpClass (cls)
	Class wide set up. More...
def	SetDataVersion (cls)
	Set another data version. More...

Static Public Attributes
	Data = os.path.join(DI_PY_ROOT, "utest", "data");
string	HeaderTok = "_HEADER";
	Pth = None;

Detailed Description

Base test class for handling multi-column files holding SNP/Gene LD information.

@var Data  Location of Unit test data files.

Member Function Documentation

SetDataVersion()

def utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase.SetDataVersion

(

cls

)

Set another data version.

    For more details, see CTestHSGeneIdConversion.
    @param cls  This class.

setUpClass()

def utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase.setUpClass

(

cls

)

Class wide set up.

    This class method must set the @c Pth and @c Cnv variables. As this is
    a setup method, it will be done prior to instantiating any objects
    from this class. Furthermore, as class methods cannot be called in the
    inheritance hierarchy, this needs to be implemented in each subclass.
    @param cls  This class.

Reimplemented in utest.tGlobalLDBlocks.CTestGlobalLDBlocks.

Member Data Documentation

Data

utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase.Data = os.path.join(DI_PY_ROOT, "utest", "data");

static

HeaderTok

string utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase.HeaderTok = "_HEADER";

static

Pth

utest.TestGlobalLDBlocksBase.CTestGlobalLDBlocksBase.Pth = None;

static

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The documentation for this class was generated from the following file:

• utest/TestGlobalLDBlocksBase.py